Adam M Deutschbauer: search on Z-Library

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1

Correction: Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

Price, Morgan N., Zane, Grant M., Kuehl, Jennifer V., Melnyk, Ryan A., Wall, Judy D., Deutschbauer, Adam M., Arkin, Adam P.

Journal:

Year:

2019

Language:

english

File:

PDF, 209 KB

english, 2019

2

Metabolomic data streaming for biology-dependent data acquisition

Rinehart, Duane, Johnson, Caroline H, Nguyen, Thomas, Ivanisevic, Julijana, Benton, H Paul, Lloyd, Jessica, Arkin, Adam P, Deutschbauer, Adam M, Patti, Gary J, Siuzdak, Gary

Journal:

Nature Biotechnology

Year:

2014

Language:

english

File:

PDF, 445 KB

english, 2014

3

Genomics for environmental microbiology

Adam M Deutschbauer, Dylan Chivian, Adam P Arkin

Journal:

Current Opinion in Biotechnology

Year:

2006

Language:

english

File:

PDF, 199 KB

english, 2006

4

Dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits in bacteria

Mutalik, Vivek K., Novichkov, Pavel S., Price, Morgan N., Owens, Trenton K., Callaghan, Mark, Carim, Sean, Deutschbauer, Adam M., Arkin, Adam P.

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 1.65 MB

english, 2019

5

Rapidly moving new bacteria to model-organism status

Liu, Hualan, Deutschbauer, Adam M

Journal:

Current Opinion in Biotechnology

Year:

2018

Language:

english

File:

PDF, 670 KB

english, 2018

6

Quantitative trait loci mapped to single-nucleotide resolution in yeast

Deutschbauer, Adam M, Davis, Ronald W

Journal:

Nature Genetics

Year:

2005

Language:

english

File:

PDF, 254 KB

english, 2005

7

Evidence-Based Annotation of Gene Function in Shewanella oneidensis MR-1 Using Genome-Wide Fitness Profiling across 121 Conditions

Deutschbauer, Adam, Price, Morgan N., Wetmore, Kelly M., Shao, Wenjun, Baumohl, Jason K., Xu, Zhuchen, Nguyen, Michelle, Tamse, Raquel, Davis, Ronald W., Arkin, Adam P., Richardson, Paul M.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.31 MB

english, 2011

8

Novel Mechanism for Scavenging of Hypochlorite Involving a Periplasmic Methionine-Rich Peptide and Methionine Sulfoxide Reductase

Melnyk, Ryan A., Youngblut, Matthew D., Clark, Iain C., Carlson, Hans K., Wetmore, Kelly M., Price, Morgan N., Iavarone, Anthony T., Deutschbauer, Adam M., Arkin, Adam P., Coates, John D.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.72 MB

english, 2015

9

GapMind: Automated Annotation of Amino Acid Biosynthesis

Price, Morgan N., Deutschbauer, Adam M., Arkin, Adam P., Hallam, Steven J.

Journal:

Year:

2020

File:

PDF, 2.06 MB

2020

10

Genetic dissection of chlorate respiration in Pseudomonas stutzeri PDA reveals syntrophic (per)chlorate reduction

Clark, Iain C., Youngblut, Matt, Jacobsen, Gillian, Wetmore, Kelly M., Deutschbauer, Adam, Lucas, Lauren, Coates, John D.

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 985 KB

english, 2015

11

Oxidative Pathways of Deoxyribose and Deoxyribonate Catabolism

Price, Morgan N., Ray, Jayashree, Iavarone, Anthony T., Carlson, Hans K., Ryan, Elizabeth M., Malmstrom, Rex R., Arkin, Adam P., Deutschbauer, Adam M., Rabaey, Korneel

Journal:

Year:

2019

Language:

english

File:

PDF, 2.66 MB

english, 2019

12

Iron Supplementation Eliminates Antagonistic Interactions Between Root-Associated Bacteria

Eng, Thomas, Herbert, Robin A., Martinez, Uriel, Wang, Brenda, Chen, Joseph C., Brown, James B., Deutschbauer, Adam M., Bissell, Mina J., Mortimer, Jenny C., Mukhopadhyay, Aindrila

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 8.33 MB

2020

13

Diverse Cellular Functions of the Hsp90 Molecular Chaperone Uncovered Using Systems Approaches

Amie J. McClellan, Yu Xia, Adam M. Deutschbauer, Ron W. Davis, Mark Gerstein, Judith Frydman

Journal:

Year:

2007

Language:

english

File:

PDF, 2.42 MB

english, 2007

14

Control of methionine metabolism by the SahR transcriptional regulator in Proteobacteria

Novichkov, Pavel S., Li, Xiaoqing, Kuehl, Jennifer V., Deutschbauer, Adam M., Arkin, Adam P., Price, Morgan N., Rodionov, Dmitry A.

Journal:

Environmental Microbiology

Year:

2014

Language:

english

File:

PDF, 363 KB

english, 2014

15

Native Plasmid-Encoded Mercury Resistance Genes Are Functional and Demonstrate Natural Transformation in Environmental Bacterial Isolates

Kothari, Ankita, Soneja, Drishti, Tang, Albert, Carlson, Hans K., Deutschbauer, Adam M., Mukhopadhyay, Aindrila, Bordenstein, Seth

Journal:

Year:

2019

File:

PDF, 2.32 MB

2019

16

Metabolic Footprinting of Mutant Libraries to Map Metabolite Utilization to Genotype

Baran, Richard, Bowen, Benjamin P., Price, Morgan N., Arkin, Adam P., Deutschbauer, Adam M., Northen, Trent R.

Journal:

ACS Chemical Biology

Year:

2013

Language:

english

File:

PDF, 1.90 MB

english, 2013

17

The essential gene set of a photosynthetic organism

Rubin, Benjamin E., Wetmore, Kelly M., Price, Morgan N., Diamond, Spencer, Shultzaberger, Ryan K., Lowe, Laura C., Curtin, Genevieve, Arkin, Adam P., Deutschbauer, Adam, Golden, Susan S.

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.15 MB

english, 2015

18

Genetic basis for nitrate resistance in Desulfovibrio strains

Korte, Hannah L., Fels, Samuel R., Christensen, Geoff A., Price, Morgan N., Kuehl, Jennifer V., Zane, Grant M., Deutschbauer, Adam M., Arkin, Adam P., Wall, Judy D.

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 1.35 MB

english, 2014

19

Genome-wide identification of Pseudomonas syringae genes required for fitness during colonization of the leaf surface and apoplast

Helmann, Tyler C., Deutschbauer, Adam M., Lindow, Steven E.

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.02 MB

english, 2019

20

Covert cross-feeding revealed by genome-wide analysis of fitness determinants in a synthetic bacterial mutualism

LaSarre, Breah, Deutschbauer, Adam M., Love, Crystal E., McKinlay, James B.

Journal:

Applied and Environmental Microbiology

Year:

2020

File:

PDF, 2.97 MB

2020

21

Systematic screen for human disease genes in yeast

Steinmetz, Lars M., Scharfe, Curt, Deutschbauer, Adam M., Mokranjac, Dejana, Herman, Zelek S., Jones, Ted, Chu, Angela M., Giaever, Guri, Prokisch, Holger, Oefner, Peter J., Davis, Ronald W.

Journal:

Nature Genetics

Year:

2002

Language:

english

File:

PDF, 355 KB

english, 2002

22

The energy-conserving electron transfer system used by D esulfovibrio alaskensis strain G20 during pyruvate fermentation involves reduction of endogenously formed fumarate and cytoplasmic and membrane-bound complexes, Hdr-Flox and Rnf

Meyer, Birte, Kuehl, Jennifer V., Price, Morgan N., Ray, Jayashree, Deutschbauer, Adam M., Arkin, Adam P., Stahl, David A.

Journal:

Environmental Microbiology

Year:

2014

Language:

english

File:

PDF, 1.71 MB

english, 2014

23

Novel Metal Cation Resistance Systems from Mutant Fitness Analysis of Denitrifying Pseudomonas stutzeri

Vaccaro, Brian J., Lancaster, W. Andrew, Thorgersen, Michael P., Zane, Grant M., Younkin, Adam D., Kazakov, Alexey E., Wetmore, Kelly M., Deutschbauer, Adam, Arkin, Adam P., Novichkov, Pavel S., Wall,

Journal:

Applied and Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 1.26 MB

english, 2016

24

Mechanisms of Chromium and Uranium Toxicity in Pseudomonas stutzeri RCH2 Grown under Anaerobic Nitrate-Reducing Conditions

Thorgersen, Michael P., Lancaster, W. Andrew, Ge, Xiaoxuan, Zane, Grant M., Wetmore, Kelly M., Vaccaro, Brian J., Poole, Farris L., Younkin, Adam D., Deutschbauer, Adam M., Arkin, Adam P., Wall, Judy

Journal:

Frontiers in Microbiology

Year:

2017

Language:

english

File:

PDF, 1017 KB

english, 2017

25

Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations

Yinjie J. Tang, Hector Garcia Martin, Adam Deutschbauer, Xueyang Feng, Rick Huang, Xavier Llora, Adam Arkin, Jay D. Keasling

Journal:

Biotechnology Progress

Year:

2009

Language:

english

File:

PDF, 249 KB

english, 2009

26

System-Wide Adaptations of Desulfovibrio alaskensis G20 to Phosphate-Limited Conditions

Bosak, Tanja, Schubotz, Florence, de Santiago-Torio, Ana, Kuehl, Jennifer V., Carlson, Hans K., Watson, Nicki, Daye, Mirna, Summons, Roger E., Arkin, Adam P., Deutschbauer, Adam M., Virolle, Marie-Joe

Journal:

Year:

2016

Language:

english

File:

PDF, 3.66 MB

english, 2016

27

Selective carbon sources influence the end products of microbial nitrate respiration

Carlson, Hans K., Lui, Lauren M., Price, Morgan N., Kazakov, Alexey E., Carr, Alex V., Kuehl, Jennifer V., Owens, Trenton K., Nielsen, Torben, Arkin, Adam P., Deutschbauer, Adam M.

Journal:

The ISME Journal

Year:

2020

File:

PDF, 2.21 MB

2020

28

Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons

Wetmore, Kelly M., Price, Morgan N., Waters, Robert J., Lamson, Jacob S., He, Jennifer, Hoover, Cindi A., Blow, Matthew J., Bristow, James, Butland, Gareth, Arkin, Adam P., Deutschbauer, Adam

Journal:

Year:

2015

Language:

english

File:

PDF, 2.94 MB

english, 2015

29

Determining Roles of Accessory Genes in Denitrification by Mutant Fitness Analyses

Vaccaro, Brian J., Thorgersen, Michael P., Lancaster, W. Andrew, Price, Morgan N., Wetmore, Kelly M., Poole, Farris L., Deutschbauer, Adam, Arkin, Adam P., Adams, Michael W.W.

Journal:

Applied and Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 1.96 MB

english, 2015

30

“Replica-Extraction-Transfer” Nanostructure-Initiator Mass Spectrometry Imaging of Acoustically Printed Bacteria

Louie, Katherine B., Bowen, Benjamin P., Cheng, Xiaoliang, Berleman, James E., Chakraborty, Romy, Deutschbauer, Adam, Arkin, Adam, Northen, Trent R.

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 1.05 MB

english, 2013

31

Identification of a Novel Cobamide Remodeling Enzyme in the Beneficial Human Gut Bacterium Akkermansia muciniphila

Mok, Kenny C., Sokolovskaya, Olga M., Nicolas, Alexa M., Hallberg, Zachary F., Deutschbauer, Adam, Carlson, Hans K., Taga, Michiko E., Lemon, Katherine P.

Journal:

Year:

2020

File:

PDF, 2.67 MB

2020

32

Magic Pools: Parallel Assessment of Transposon Delivery Vectors in Bacteria

Liu, Hualan, Price, Morgan N., Waters, Robert Jordan, Ray, Jayashree, Carlson, Hans K., Lamson, Jacob S., Chakraborty, Romy, Arkin, Adam P., Deutschbauer, Adam M., Typas, Nassos

Journal:

Year:

2018

Language:

english

File:

PDF, 2.68 MB

english, 2018

33

Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site

Ray, Jayashree, Waters, R. Jordan, Skerker, Jeffrey M., Kuehl, Jennifer V., Price, Morgan N., Huang, Jiawen, Chakraborty, Romy, Arkin, Adam P., Deutschbauer, Adam

Journal:

Genome Announcements

Year:

2015

Language:

english

File:

PDF, 159 KB

english, 2015

34

Genetic plasticity and Ethylmalonyl-CoA Pathway during acetate assimilation in Rhodospirillum rubrum S1H under photoheterotrophic conditions.

De Meur, Quentin, Deutschbauer, Adam, Koch, Matthias, Wattiez, Ruddy, Leroy, Baptiste

Journal:

Applied and Environmental Microbiology

Year:

2017

Language:

english

File:

PDF, 2.72 MB

english, 2017

35

Oxidative Pathways of Deoxyribose and Deoxyribonate Catabolism

Price, Morgan N., Ray, Jayashree, Iavarone, Anthony T., Carlson, Hans K., Ryan, Elizabeth M., Malmstrom, Rex R., Arkin, Adam P., Deutschbauer, Adam M., Rabaey, Korneel

Journal:

Year:

2019

File:

PDF, 2.66 MB

2019

36

Analysis of the photoheterotrophic assimilation of valerate and associated PHA production by Rs. rubrum

Bayon-Vicente, Guillaume, Zarbo, Sarah, Deutschbauer, Adam, Wattiez, Ruddy, Leroy, Baptiste

Journal:

Applied and Environmental Microbiology

Year:

2020

File:

PDF, 2.85 MB

2020

37

Gene Annotation and Drug Target Discovery in Candida albicans with a Tagged Transposon Mutant Collection

Oh, Julia, Fung, Eula, Schlecht, Ulrich, Davis, Ronald W., Giaever, Guri, St. Onge, Robert P., Deutschbauer, Adam, Nislow, Corey, Filler, Scott G.

Journal:

Year:

2010

Language:

english

File:

PDF, 6.73 MB

english, 2010

38

Genome-Wide Transposon Screen of a Pseudomonas syringae mexB Mutant Reveals the Substrates of Efflux Transporters

Helmann, Tyler C., Ongsarte, Caitlin L., Lam, Jennifer, Deutschbauer, Adam M., Lindow, Steven E., Guttman, David S.

Journal:

Year:

2019

File:

PDF, 1.90 MB

2019

39

Principles of Systems Biology, No. 30

Garcia, Hernan G., Benzinger, Dirk, Rullan, Marc, Milias-Argeitis, Andreas, Khammash, Mustafa, Deutschbauer, Adam M., Langdon, Erin M., Gladfelter, Amy S.

Journal:

Year:

2018

Language:

english

File:

PDF, 203 KB

english, 2018

40

Distinctiveness of genes contributing to growth of Pseudomonas syringae in diverse host plant species

Helmann, Tyler C., Deutschbauer, Adam M., Lindow, Steven E., Wilson, Richard A

Journal:

Year:

2020

File:

PDF, 1.24 MB

2020

41

Monofluorophosphate Is a Selective Inhibitor of Respiratory Sulfate-Reducing Microorganisms

Carlson, Hans K., Stoeva, Magdalena K., Justice, Nicholas B., Sczesnak, Andrew, Mullan, Mark R., Mosqueda, Lorraine A., Kuehl, Jennifer V., Deutschbauer, Adam M., Arkin, Adam P., Coates, John D.

Journal:

Environmental Science & Technology

Year:

2015

Language:

english

File:

PDF, 3.32 MB

english, 2015

42

Exometabolomics Assisted Design and Validation of Synthetic Obligate Mutualism

Kosina, Suzanne M., Danielewicz, Megan A., Mohammed, Mujahid, Ray, Jayashree, Suh, Yumi, Yilmaz, Suzan, Singh, Anup K., Arkin, Adam P., Deutschbauer, Adam M., Northen, Trent R.

Journal:

ACS Synthetic Biology

Year:

2016

Language:

english

File:

PDF, 1.66 MB

english, 2016

43

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

Price, Morgan N., Zane, Grant M., Kuehl, Jennifer V., Melnyk, Ryan A., Wall, Judy D., Deutschbauer, Adam M., Arkin, Adam P., Casadesús, Josep

Journal:

Year:

2018

Language:

english

File:

PDF, 3.44 MB

english, 2018

44

A Comparison of the Costs and Benefits of Bacterial Gene Expression

Price, Morgan N., Wetmore, Kelly M., Deutschbauer, Adam M., Arkin, Adam P., Pfleger, Brian Frederick

Journal:

Year:

2016

Language:

english

File:

PDF, 3.09 MB

english, 2016

45

Draft Genome Sequences of Two Janthinobacterium lividum Strains, Isolated from Pristine Groundwater Collected from the Oak Ridge Field Research Center

Wu, Xiaoqin, Deutschbauer, Adam M., Kazakov, Alexey E., Wetmore, Kelly M., Cwick, Bryson A., Walker, Robert M., Novichkov, Pavel S., Arkin, Adam P., Chakraborty, Romy

Journal:

Genome Announcements

Year:

2017

Language:

english

File:

PDF, 133 KB

english, 2017

46

Gene function on a genomic scale

Lars M Steinmetz, Adam M Deutschbauer

Journal:

Journal of Chromatography B

Year:

2002

Language:

english

File:

PDF, 378 KB

english, 2002

47

Characterization of a Metal-Resistant Bacillus Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation

Ge, Xiaoxuan, Thorgersen, Michael P., Poole, Farris L., Deutschbauer, Adam M., Chandonia, John-Marc, Novichkov, Pavel S., Gushgari-Doyle, Sara, Lui, Lauren M., Nielsen, Torben, Chakraborty, Romy, Adam

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 5.77 MB

2020

48

Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism

Yinjie J. Tang, Hector Garcia Martin, Paramvir S. Dehal, Adam Deutschbauer, Xavier Llora, Adam Meadows, Adam Arkin, Jay. D. Keasling

Journal:

Biotechnology and Bioengineering

Year:

2009

Language:

english

File:

PDF, 368 KB

english, 2009

49

Meta-analysis of global metabolomics and proteomics data to link alterations with phenotype

Patti, Gary J., Tautenhahn, Ralf, Fonslow, Bryan R., Cho, Yonghoon, Deutschbauer, Adam, Arkin, Adam, Northen, Trent, Siuzdak, Gary

Journal:

Spectroscopy / An International Journal

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

50

The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20

Price, Morgan N., Ray, Jayashree, Wetmore, Kelly M., Kuehl, Jennifer V., Bauer, Stefan, Deutschbauer, Adam M., Arkin, Adam P.

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 5.22 MB

english, 2014

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